Index _ | A | B | C | D | E | F | G | I | J | K | L | M | N | O | P | R | S | T | U | V | W | Y _ __init__() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (spec_time_series method) (StarInfo method) (table method) (Table_stellar_model method) (tableXY method) (Task method) (Telluric_spectrum method) __new__() (Contam_HARPN static method) (FixedFloat static method) (FixedInt static method) (FixedString static method) (Ghost_HARPN static method) (SIF_float static method) (SIF_float_telluric static method) (SIF_int static method) (SIF_str static method) (SIMBADEntry static method) (StarInfo static method) (Table_stellar_model static method) (Telluric_spectrum static method) A assert_never() (in module yarara.util) auto_axis() (in module yarara.plots) B berv (Ghost_HARPN attribute) Bmag (SIMBADEntry attribute) BV (SIMBADEntry attribute) (StarInfo attribute) C ccf() (tableXY method) CCF_delta (SIMBADEntry attribute) (StarInfo attribute) ccf_fun() (in module yarara.util) center_symmetrise() (tableXY method) clear() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) cli() (in module yarara.run_yarara) clip() (tableXY method) close_figure (Task attribute) clustering() (in module yarara.stats) combination() (in module yarara.stats.misc) contam (Contam_HARPN attribute) contam_1 (Contam_HARPN attribute) contam_2 (Contam_HARPN attribute) contam_backup (Contam_HARPN attribute) Contam_HARPN (class in yarara.materials) continuum_error() (spec_time_series method) Contrast (SIMBADEntry attribute) (StarInfo attribute) copy() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (tableXY method) (Telluric_spectrum method) D dace_statistic() (spec_time_series method) data_folder (Task attribute) Dec (SIMBADEntry attribute) (StarInfo attribute) description_ (Task attribute) dico_tree (spec_time_series attribute) diff() (tableXY method) dir_root (spec_time_series attribute) directory (spec_time_series attribute) Dist_pc (SIMBADEntry attribute) (StarInfo attribute) doppler_r() (in module yarara.util) E env_prefix_ (Task attribute) F FeH (SIMBADEntry attribute) (StarInfo attribute) find_max() (tableXY method) find_min() (tableXY method) find_nearest() (in module yarara.stats.nearest) fit_base() (table method) fit_gaussian() (tableXY method) fit_poly() (tableXY method) fit_sinus() (tableXY method) fixed (FixedFloat attribute) (FixedInt attribute) (FixedString attribute) (SIF_float attribute) (SIF_float_telluric attribute) (SIF_int attribute) (SIF_str attribute) FixedFloat (class in yarara.materials) FixedInt (class in yarara.materials) FixedString (class in yarara.materials) flux_error() (spec_time_series method) flux_norm (Telluric_spectrum attribute) flux_norm_std() (in module yarara.util) from_command_line_() (Task class method) fromkeys() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) FWHM (SIMBADEntry attribute) fwhm (spec_time_series attribute) FWHM (StarInfo attribute) G gaussian() (in module yarara.mathfun) get() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) get_argument_parser_() (Task class method) get_phase() (in module yarara.util) ghost_a (Ghost_HARPN attribute) ghost_b (Ghost_HARPN attribute) Ghost_HARPN (class in yarara.materials) I identify_nearest() (in module yarara.stats.nearest) import_ccf() (spec_time_series method) import_dace_sts() (spec_time_series method) import_dico_chain() (spec_time_series method) import_dico_tree() (spec_time_series method) import_info_reduction() (spec_time_series method) import_material() (spec_time_series method) import_rassine_output() (spec_time_series method) import_spectrum() (spec_time_series method) import_star_info() (spec_time_series method) import_sts_flux() (spec_time_series method) import_table() (spec_time_series method) info_reduction_ut (spec_time_series attribute) ini_relaxed_sections_ (Task attribute) ini_sections_() (Task class method) ini_strict_sections_ (Task attribute) init_matplotlib() (in module yarara.plots) instrument (spec_time_series attribute) interpolate() (tableXY method) IQ() (in module yarara.stats.misc) items() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) IV (Table_stellar_model attribute) J jdb (Ghost_HARPN attribute) K keys() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) L load_and_adapt_input_data() (in module yarara.stages) local_max() (in module yarara.stats.misc) Log_g (SIMBADEntry attribute) (StarInfo attribute) lorentzian() (in module yarara.mathfun) M mad() (in module yarara.stats.misc) magB (StarInfo attribute) magR (StarInfo attribute) magU (StarInfo attribute) magV (StarInfo attribute) map_rnr() (in module yarara.util) mask_ccf_folder (spec_time_series attribute) (Task attribute) match_nearest() (in module yarara.stats.nearest) match_x() (tableXY method) matching_activity() (in module yarara.stages) matching_brute() (in module yarara.stages) matching_contam() (in module yarara.stages) matching_cosmics() (in module yarara.stages) matching_fourier() (in module yarara.stages) matching_ghost_a() (in module yarara.stages) matching_ghost_b() (in module yarara.stages) matching_mad() (in module yarara.stages) matching_oxygen() (in module yarara.stages) matching_pca() (in module yarara.stages) matching_smooth() (in module yarara.stages) matching_telluric() (in module yarara.stages) material (spec_time_series attribute) material_folder (spec_time_series attribute) (Task attribute) merge_borders() (in module yarara.stats.misc) module yarara yarara.analysis yarara.analysis.table_xy yarara.constants yarara.deprecated yarara.iofun yarara.materials yarara.mathfun yarara.plots yarara.run_yarara yarara.stages yarara.stats yarara.stats.misc yarara.stats.nearest yarara.sts yarara.util Mstar (SIMBADEntry attribute) (StarInfo attribute) my_colormesh() (in module yarara.plots) my_ruler() (in module yarara.util) myscatter() (tableXY method) N Name (SIMBADEntry attribute) (StarInfo attribute) night_stack() (tableXY method) null() (tableXY method) O open_pickle() (in module yarara.iofun) order() (tableXY method) P parabole() (in module yarara.mathfun) parse_command_line_() (Task class method) parse_ini_contents_() (Task class method) parse_ini_file_() (Task class method) pickle_dump() (in module yarara.iofun) planet (spec_time_series attribute) plot() (tableXY method) plot_color_box() (in module yarara.plots) plot_copy_time() (in module yarara.plots) Pma (SIMBADEntry attribute) (StarInfo attribute) Pmag (SIMBADEntry attribute) (StarInfo attribute) Pmd (SIMBADEntry attribute) (StarInfo attribute) pop() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) popitem() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) preprocessing() (in module yarara.stages) print_box() (in module yarara.util) print_iter() (in module yarara.util) processor_() (Task class method) prog (Task attribute) prog_ (Task attribute) Prot (SIMBADEntry attribute) (StarInfo attribute) R r_matrix() (table method) Ra (SIMBADEntry attribute) (StarInfo attribute) ratio_line() (in module yarara.util) read_ccf_mask() (spec_time_series method) recenter() (tableXY method) reference (Task attribute) replace_nan() (tableXY method) rm_outliers() (in module yarara.stats) (tableXY method) Rmag (SIMBADEntry attribute) rms_w() (table method) (tableXY method) rolling() (tableXY method) Rstar (SIMBADEntry attribute) (StarInfo attribute) run() (in module yarara.run_yarara) RV_sys (SIMBADEntry attribute) Rv_sys (StarInfo attribute) S save_pickle() (in module yarara.iofun) scale_cmap() (spec_time_series method) setdefault() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) SIF_float (class in yarara.sts) SIF_float_telluric (class in yarara.sts) SIF_int (class in yarara.sts) SIF_str (class in yarara.sts) simbad_folder (spec_time_series attribute) (Task attribute) Simbad_name (SIMBADEntry attribute) (StarInfo attribute) SIMBADEntry (class in yarara.materials) sinus() (in module yarara.mathfun) smooth() (in module yarara.stats) (tableXY method) snr_statistic() (spec_time_series method) sorted_rassine_pickles() (spec_time_series method) Sp_type (SIMBADEntry attribute) (StarInfo attribute) spec_time_series (class in yarara.sts) species_recenter() (tableXY method) spectrum() (spec_time_series method) sphinx() (in module yarara.util) stage_break (Task attribute) stage_start (Task attribute) star_info (spec_time_series attribute) StarInfo (class in yarara.sts) starname (spec_time_series attribute) statistics() (in module yarara.stages) stellar_atmos1() (in module yarara.stages) stellar_template (SIMBADEntry attribute) (StarInfo attribute) stitching (Ghost_HARPN attribute) string_contained_in() (in module yarara.util) substract_polyfit() (tableXY method) suppress_low_snr_spectra() (spec_time_series method) suppress_mask() (tableXY method) suppress_nan() (tableXY method) suppress_time_RV() (spec_time_series method) suppress_time_spectra() (spec_time_series method) switch() (tableXY method) T table (class in yarara.analysis) Table_stellar_model (class in yarara.materials) tableXY (class in yarara.analysis.table_xy) Task (class in yarara.run_yarara) Teff (SIMBADEntry attribute) (StarInfo attribute) telluric (SIF_float_telluric attribute) Telluric_spectrum (class in yarara.materials) touch_pickle() (in module yarara.iofun) transit_draw() (in module yarara.plots) try_field() (in module yarara.deprecated) U UB (SIMBADEntry attribute) (StarInfo attribute) Umag (SIMBADEntry attribute) uncorrect_hole() (spec_time_series method) update() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) update_info_reduction() (spec_time_series method) V V (Table_stellar_model attribute) validate_data_folder() (Task method) validators_() (Task class method) values() (Contam_HARPN method) (FixedFloat method) (FixedInt method) (FixedString method) (Ghost_HARPN method) (SIF_float method) (SIF_float_telluric method) (SIF_int method) (SIF_str method) (SIMBADEntry method) (StarInfo method) (Table_stellar_model method) (Telluric_spectrum method) version_() (Task class method) Vmag (SIMBADEntry attribute) Vmicro (SIMBADEntry attribute) (StarInfo attribute) voigt() (in module yarara.mathfun) VR (SIMBADEntry attribute) (StarInfo attribute) Vsini (SIMBADEntry attribute) (StarInfo attribute) W wave (Contam_HARPN attribute) (Ghost_HARPN attribute) (Telluric_spectrum attribute) WPCA() (table method) Y yarara module YARARA (SIF_float attribute) (SIF_float_telluric attribute) (SIF_int attribute) (SIF_str attribute) yarara.analysis module yarara.analysis.table_xy module yarara.constants module yarara.deprecated module yarara.iofun module yarara.materials module yarara.mathfun module yarara.plots module yarara.run_yarara module yarara.stages module yarara.stats module yarara.stats.misc module yarara.stats.nearest module yarara.sts module yarara.util module yarara_activity_index() (spec_time_series method) yarara_add_ccf_entry() (spec_time_series method) yarara_add_map() (spec_time_series method) yarara_add_step_dico() (spec_time_series method) yarara_analyse_summary() (spec_time_series method) yarara_artefact_suppressed() (in module yarara.util) yarara_berv_summary() (spec_time_series method) yarara_ccf() (spec_time_series method) yarara_ccf_save() (spec_time_series method) yarara_check_fwhm() (spec_time_series method) yarara_check_rv_sys() (spec_time_series method) yarara_color_template() (spec_time_series method) yarara_comp_all() (spec_time_series method) yarara_correct_activity() (spec_time_series method) yarara_correct_borders_pxl() (spec_time_series method) yarara_correct_brute() (spec_time_series method) yarara_correct_cosmics() (spec_time_series method) yarara_correct_frog() (spec_time_series method) yarara_correct_mad() (spec_time_series method) yarara_correct_oxygen() (spec_time_series method) yarara_correct_pattern() (spec_time_series method) yarara_correct_secular_acc() (spec_time_series method) yarara_correct_smooth() (spec_time_series method) yarara_correct_telluric_gradient() (spec_time_series method) yarara_correct_telluric_proxy() (spec_time_series method) yarara_cut_spectrum() (spec_time_series method) yarara_exploding_pickle() (spec_time_series method) yarara_flux_constant() (spec_time_series method) yarara_get_berv_value() (spec_time_series method) yarara_get_bin_length() (spec_time_series method) yarara_get_first_wave() (spec_time_series method) yarara_get_orders() (spec_time_series method) yarara_get_pixels() (spec_time_series method) yarara_map() (spec_time_series method) yarara_map_1d_to_2d() (spec_time_series method) yarara_map_all() (spec_time_series method) yarara_master_ccf() (spec_time_series method) yarara_median_master() (spec_time_series method) yarara_non_zero_flux() (spec_time_series method) yarara_obs_info() (spec_time_series method) yarara_plot_all() (spec_time_series method) yarara_poissonian_noise() (spec_time_series method) yarara_produce_mask_contam() (spec_time_series method) yarara_produce_mask_frog() (spec_time_series method) yarara_retropropagation_correction() (spec_time_series method) yarara_simbad_query() (spec_time_series method) yarara_star_info() (spec_time_series method) yarara_substract_map() (spec_time_series method) yarara_suppress_doubtful_spectra() (spec_time_series method) yarara_telluric() (spec_time_series method) yarara_transit_def() (spec_time_series method)